Commit
·
67cda84
1
Parent(s):
0f64164
Update README.md
Browse files
README.md
CHANGED
@@ -1,4 +1,6 @@
|
|
1 |
# Processed whole-genome alignment of 100 vertebrate species
|
|
|
|
|
2 |
Source data:
|
3 |
- MSA was downloaded from http://hgdownload.soe.ucsc.edu/goldenPath/hg38/multiz100way/
|
4 |
- Human sequence was replaced with a newer reference:
|
@@ -8,9 +10,6 @@ Available MSAs:
|
|
8 |
- `89.zarr.zip` contains human + 89 vertebrates (excluding 10 closest primates)
|
9 |
- `99.zarr.zip` contains human + 99 vertebrates
|
10 |
|
11 |
-
Processing details:
|
12 |
-
- See `paper_url` and https://github.com/songlab-cal/gpn
|
13 |
-
|
14 |
Example usage:
|
15 |
```python
|
16 |
from gpn.data import GenomeMSA
|
|
|
1 |
# Processed whole-genome alignment of 100 vertebrate species
|
2 |
+
For more information check out our [paper](https://doi.org/10.1101/2023.10.10.561776) and [repository](https://github.com/songlab-cal/gpn).
|
3 |
+
|
4 |
Source data:
|
5 |
- MSA was downloaded from http://hgdownload.soe.ucsc.edu/goldenPath/hg38/multiz100way/
|
6 |
- Human sequence was replaced with a newer reference:
|
|
|
10 |
- `89.zarr.zip` contains human + 89 vertebrates (excluding 10 closest primates)
|
11 |
- `99.zarr.zip` contains human + 99 vertebrates
|
12 |
|
|
|
|
|
|
|
13 |
Example usage:
|
14 |
```python
|
15 |
from gpn.data import GenomeMSA
|